John McCutcheon

Department of Ecology & Evolutionary Biology
jmccutch@email.arizona.edu
Ph: (520) 626-8661
Fax: (520) 621-3709
Mailing address: P.O. Box 210088, University of Arizona, Tucson, Arizona 85721-0088

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Publications

Moran, N.A., McCutcheon, J.P., and Nakabachi, A. Genomics and evolution of heritable bacterial symbionts. Annu. Rev. Genet. In press.

McCutcheon, J.P. and Moran, N.A. 2007. Parallel genomic evolution and metabolic interdependence in an ancient symbiosis. Proceedings of the National Academy of Sciences USA 104: 19392-19397.

Shendure, J., Porreca, G.J., Reppas, N.B., Lin, X., McCutcheon, J.P., Rosenbaum, A.M., Wang, M.D., Zhang, K., Mitra, R.D., and Church, G.M. 2005. Accurate multiplex polony sequencing of an evolved bacterial genome. Science 309: 1728-1732.

McCutcheon, J.P. and Eddy, S.R. 2003. Computational identification of non-coding RNAs in Saccharomyces cerevisiae by comparative genomics. Nucleic Acids Research 31: 4119-4128.

Clemons, W.M.Jr., Broderson, D.E., McCutcheon, J.P., May, J.L., Carter, A.P., Morgan-Warren, R.J., Wimberly, B.T., and Ramakrishnan, V. 2001. Crystal structure of the 30 S ribosomal subunit from Thermus thermophilus: purification, crystallization and structure determination. Journal of Molecular Biology 310: 827-843.

Clemons, W.M.Jr., Wimberly, B.T., May, J.L., McCutcheon, J.P., Capel, M.S., and Ramakrishnan, V. 1999. Structure of a bacterial 30S ribosomal subunit at 5.5 Angstrom resolution. Nature 400: 833-840.

Wimberly, B.T., Guymon, R., McCutcheon, J.P., White, S.W., and Ramakrishnan, V. 1999. A detailed view of a ribosomal active site: the structure of the L11-RNA complex. Cell 97: 491-502.

McCutcheon, J.P., Agrawal, R.K., Philips, S.M., Grassucci, R.A., Gerchman, S.E., Clemons, W.M.Jr., Ramakrishnan, V., and Frank, J. 1999. Location of translational initiation factor IF3 on the small ribosomal subunit. Proceedings of the National Academy of Sciences USA 96: 4301-4306.

Gamble, T.R., Yoo, S., Vajdos, F.F., von Schwedler, U.K., Worthylake, D.K., Wang, H., McCutcheon, J.P., Sundquist, W.I., and Hill, C.P. 1997. Structure of the carboxyl-terminal dimerization domain of the HIV-1 capsid protein. Science 278: 849-853.

Felden, B., Himeno, H., Muto, A., McCutcheon, J.P., Atkins, J.F., and Gesteland, R.F. 1997. Probing the structure of the Escherichia coli 10Sa RNA (tmRNA). RNA 3: 89-103.